Google Scholar profile
Shah PT, Valiante TA, Packer AM (2023) All-optical interrogation of excitability during seizure propagation reveals high local inhibition amidst baseline excitability
bioRxiv 524224 doi.org/10.1101/2023.01.16.524224
Hu Q, Hailstone M, Wang J, Wincott M, Stoychev D, Atilgan H, Gala D, Chaiamarit T, Parton RM, Antonello J, Packer AM, Davis I, Booth MJ (2023) Universal adaptive optics for microscopy through embedded neural network control.
arXiv 2301.02647 https://doi.org/10.48550/arXiv.2301.02647
Barack DL, Miller EK, Moore CI, Packer AM, Pessoa L, Ross LN, Rust NC (2022) A call for more clarity around causality in neuroscience.
Trends in Neurosciences https://doi.org/10.1016/j.tins.2022.06.003
Shelton AM, Oliver DK, Grimstvedt JS, Lazarte IP, Swann JA, Kapoor I, Williams SN, Ashcroft CA, Kentros CG, Witter MP, Butt SJB, Packer AM (2022) Single neurons and networks in the claustrum integrate input from widespread cortical sources.
bioRxiv 490864 https://doi.org/10.1101/2022.05.06.490864
Hoerder-Suabedissen A, Ocana-Santero G, Draper T, Scott S, Shelton AM, Butt SJB, Molnar Z, Packer AM (2022) Temporal origin of mouse claustrum and development of its cortical projections.
bioRxiv 492804 https://doi.org/10.1101/2022.05.20.492804
Grimstvedt JS, Shelton AM, Hoerder-Suabedissen A, Oliver DK, Berndtsson CH, Blankvoort S, Nair RR, Packer AM, Witter MP, Kentros CG (2022). A multifaceted architectural framework of the mouse claustrum complex.
bioRxiv 494429 https://doi.org/10.1101/2022.06.02.494429
Rowland JM*, Van der Plas TL*, Loidolt M*, Lees RM, Keeling J, Dehning J, Akam T, Priesemann V, Packer AM (2021) Perception and propagation of activity through the cortical hierarchy is determined by neural variability.
bioRxiv 474343 https://doi.org/10.1101/2021.12.28.474343
Atilgan H*, Doody M*, Oliver DK*, McGrath TM, Shelton AM, Echeverria-Altuna I, Tracey I, Vyazovskiy VV, Manohar SG, Packer AM (2021) Human lesions and animal studies link the claustrum to perception, salience, sleep, and pain.
Brain https://doi.org/10.1093/brain/awac114 *Authors contributed equally.
Sun B, Wang M, Hoerder-Suabedissen A, Xu C, Packer AM†, Szele FG† (2021) Intravital imaging of the murine subventricular zone with three photon microscopy.
Cerebral Cortex https://doi.org/10.1093/cercor/bhab400
Russell LE*, Dalgleish HWP*, Nutbrown R, Gauld OM, Herrmann D, Fişek M, Packer AM@, Häusser M@ (2021) All-optical interrogation of neural circuits in behaving mice
Nature Protocols https://doi.org/10.1038/s41596-022-00691-w *Authors contributed equally. @Corresponding authors.
Dalgleish HWP*, Russell LE*, Packer AM*, Roth A, Gauld OM, Greenstreet F, Thompson EJ, Häusser M (2020) How many neurons are sufficient for perception of cortical activity?
eLife doi: https://doi.org/10.7554/eLife.58889 *Authors contributed equally.
Bruguier H, Suarez R, Manger P, Hoerder-Suabedissen A, Shelton AM, Oliver DK, Packer AM, Ferran JL, Garcia-Moreno F, Puelles L, Molnar Z (2020) In search of common developmental and evolutionary origin of the claustrum and subplate
Journal of Comparative Neurology doi.org/10.1002/cne.24922
Russell LE, Yang Z, Pei LT, Fisek M, Packer AM, Dalgleish HWP, Chettih S, Harvey CD, Häusser M (2019) The influence of visual cortex on perception is modulated by behavioural state
bioRxiv 706010; doi: https://doi.org/10.1101/706010
Zhang Z*, Russell LE*, Packer AM*, Gauld OM, Häusser M (2018) Closed-loop all-optical interrogation of neural circuits in vivo
Nature Methods https://doi.org/10.1038/s41592-018-0183-z *Authors contributed equally.
Aitchison L, Russell LE, Packer AM, Yan J, Castonguay P, Häusser M, Turaga SC (2017) Model-based Bayesian inference of neural activity and connectivity from all-optical interrogation of a neural circuit
Advances in Neural Information Processing Systems 30:3488-3497.
Watson BO, Yuste R, Packer AM (2016) PackIO and EphysViewer: software tools for acquisition and analysis of neuroscience data
bioRxiv http://dx.doi.org/10.1101/054080
Packer AM, Russell LE, Dalgleish HWP, Häusser M (2015) Simultaneous all-optical targeted manipulation and recording of neural circuit activity with cellular resolution in vivo.
Nature Methods 12:140-146.
Packer AM, Roska B, Häusser M (2013) Targeting neurons and photons for optogenetics
Nature Neuroscience 16:805-815.
Pachitariu M, Packer AM, Pettit N, Dalgleish H, Häusser M, Sahani M (2013) Extracting regions of interest from biological images with convolutional sparse block coding
Advances in Neural Information Processing Systems 26:1745-1753.
Turaga S, Buesing L, Packer AM, Dalgleish H, Pettit N, Häusser M, Macke J (2013) Inferring neural population dynamics from multiple partial recordings of the same neural circuit
Advances in Neural Information Processing Systems 26:539-547.
Packer AM, McConnell DJ, Fino E, Yuste R (2013) Axo-dendritic overlap and laminar projection can explain interneuron connectivity to pyramidal cells
Cerebral Cortex 23(12):2790-2802. *Selected for cover
Fino EF*, Packer AM*, Yuste R (2013) The Logic of Inhibitory Connectivity in the Neocortex
The Neuroscientist 19(3):228-237. *Authors contributed equally.
Packer AM*, Peterka DS*, Hirtz JJ, Prakash R, Deisseroth K, Yuste R (2012) Two-photon optogenetics of dendritic spines and neural circuits
Nature Methods 9:1202-1205. *Authors contributed equally.
Prakash R, Yizhar O, Grewe B, Ramakrishnan C, Wang N, Goshen I, Packer AM, Peterka DS, Yuste R, Schnitzer MJ, Deisseroth, K (2012) Two-photon optogenetic toolbox for fast inhibition, excitation, and bistable modulation
Nature Methods 9:1171-1179.
Packer AM, Yuste R (2011) Dense, unspecific connectivity of neocortical parvalbumin-positive interneurons: a canonical microcircuit for inhibition?
Journal of Neuroscience 31(37):13260-13271. *Selected for cover
Ahmadian Y, Packer AM, Yuste R, Paninski L. (2011) Designing optimal stimuli to control neuronal spike timing
J. Neurophys. 106(2):1038-1053.
Snider SB, Yuste R, Packer AM. (2010) A neural circuit for angular velocity computation
Frontiers in Neural Circuits 4:123.
McGarry LM, Packer AM, Fino E, Nikolenko V, Sippy T, Yuste R. (2010) Quantitative classification of somatostatin-positive neocortical interneurons identifies three interneuron subtypes
Frontiers in Neural Circuits 4:12.
Vogelstein J, Packer AM, Machado T, Sippy T, Babadi B, Yuste R, Paninski L. (2010) Fast non-negative deconvolution for spike train inference from population calcium imaging
J. Neurophys. 104(6):3691-704.
Vogelstein J, Watson B, Packer AM, Yuste R, Jedynak B, Paninski L. (2009) Spike inference from calcium imaging using sequential Monte Carlo methods
Biophysical Journal 97:636-55.
Ascoli G, et al. (2008) Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex
Nature Reviews Neuroscience 9:557-568.
Shah PT, Valiante TA, Packer AM (2023) All-optical interrogation of excitability during seizure propagation reveals high local inhibition amidst baseline excitability
bioRxiv 524224 doi.org/10.1101/2023.01.16.524224
Hu Q, Hailstone M, Wang J, Wincott M, Stoychev D, Atilgan H, Gala D, Chaiamarit T, Parton RM, Antonello J, Packer AM, Davis I, Booth MJ (2023) Universal adaptive optics for microscopy through embedded neural network control.
arXiv 2301.02647 https://doi.org/10.48550/arXiv.2301.02647
Barack DL, Miller EK, Moore CI, Packer AM, Pessoa L, Ross LN, Rust NC (2022) A call for more clarity around causality in neuroscience.
Trends in Neurosciences https://doi.org/10.1016/j.tins.2022.06.003
Shelton AM, Oliver DK, Grimstvedt JS, Lazarte IP, Swann JA, Kapoor I, Williams SN, Ashcroft CA, Kentros CG, Witter MP, Butt SJB, Packer AM (2022) Single neurons and networks in the claustrum integrate input from widespread cortical sources.
bioRxiv 490864 https://doi.org/10.1101/2022.05.06.490864
Hoerder-Suabedissen A, Ocana-Santero G, Draper T, Scott S, Shelton AM, Butt SJB, Molnar Z, Packer AM (2022) Temporal origin of mouse claustrum and development of its cortical projections.
bioRxiv 492804 https://doi.org/10.1101/2022.05.20.492804
Grimstvedt JS, Shelton AM, Hoerder-Suabedissen A, Oliver DK, Berndtsson CH, Blankvoort S, Nair RR, Packer AM, Witter MP, Kentros CG (2022). A multifaceted architectural framework of the mouse claustrum complex.
bioRxiv 494429 https://doi.org/10.1101/2022.06.02.494429
Rowland JM*, Van der Plas TL*, Loidolt M*, Lees RM, Keeling J, Dehning J, Akam T, Priesemann V, Packer AM (2021) Perception and propagation of activity through the cortical hierarchy is determined by neural variability.
bioRxiv 474343 https://doi.org/10.1101/2021.12.28.474343
Atilgan H*, Doody M*, Oliver DK*, McGrath TM, Shelton AM, Echeverria-Altuna I, Tracey I, Vyazovskiy VV, Manohar SG, Packer AM (2021) Human lesions and animal studies link the claustrum to perception, salience, sleep, and pain.
Brain https://doi.org/10.1093/brain/awac114 *Authors contributed equally.
Sun B, Wang M, Hoerder-Suabedissen A, Xu C, Packer AM†, Szele FG† (2021) Intravital imaging of the murine subventricular zone with three photon microscopy.
Cerebral Cortex https://doi.org/10.1093/cercor/bhab400
Russell LE*, Dalgleish HWP*, Nutbrown R, Gauld OM, Herrmann D, Fişek M, Packer AM@, Häusser M@ (2021) All-optical interrogation of neural circuits in behaving mice
Nature Protocols https://doi.org/10.1038/s41596-022-00691-w *Authors contributed equally. @Corresponding authors.
Dalgleish HWP*, Russell LE*, Packer AM*, Roth A, Gauld OM, Greenstreet F, Thompson EJ, Häusser M (2020) How many neurons are sufficient for perception of cortical activity?
eLife doi: https://doi.org/10.7554/eLife.58889 *Authors contributed equally.
Bruguier H, Suarez R, Manger P, Hoerder-Suabedissen A, Shelton AM, Oliver DK, Packer AM, Ferran JL, Garcia-Moreno F, Puelles L, Molnar Z (2020) In search of common developmental and evolutionary origin of the claustrum and subplate
Journal of Comparative Neurology doi.org/10.1002/cne.24922
Russell LE, Yang Z, Pei LT, Fisek M, Packer AM, Dalgleish HWP, Chettih S, Harvey CD, Häusser M (2019) The influence of visual cortex on perception is modulated by behavioural state
bioRxiv 706010; doi: https://doi.org/10.1101/706010
Zhang Z*, Russell LE*, Packer AM*, Gauld OM, Häusser M (2018) Closed-loop all-optical interrogation of neural circuits in vivo
Nature Methods https://doi.org/10.1038/s41592-018-0183-z *Authors contributed equally.
Aitchison L, Russell LE, Packer AM, Yan J, Castonguay P, Häusser M, Turaga SC (2017) Model-based Bayesian inference of neural activity and connectivity from all-optical interrogation of a neural circuit
Advances in Neural Information Processing Systems 30:3488-3497.
Watson BO, Yuste R, Packer AM (2016) PackIO and EphysViewer: software tools for acquisition and analysis of neuroscience data
bioRxiv http://dx.doi.org/10.1101/054080
Packer AM, Russell LE, Dalgleish HWP, Häusser M (2015) Simultaneous all-optical targeted manipulation and recording of neural circuit activity with cellular resolution in vivo.
Nature Methods 12:140-146.
Packer AM, Roska B, Häusser M (2013) Targeting neurons and photons for optogenetics
Nature Neuroscience 16:805-815.
Pachitariu M, Packer AM, Pettit N, Dalgleish H, Häusser M, Sahani M (2013) Extracting regions of interest from biological images with convolutional sparse block coding
Advances in Neural Information Processing Systems 26:1745-1753.
Turaga S, Buesing L, Packer AM, Dalgleish H, Pettit N, Häusser M, Macke J (2013) Inferring neural population dynamics from multiple partial recordings of the same neural circuit
Advances in Neural Information Processing Systems 26:539-547.
Packer AM, McConnell DJ, Fino E, Yuste R (2013) Axo-dendritic overlap and laminar projection can explain interneuron connectivity to pyramidal cells
Cerebral Cortex 23(12):2790-2802. *Selected for cover
Fino EF*, Packer AM*, Yuste R (2013) The Logic of Inhibitory Connectivity in the Neocortex
The Neuroscientist 19(3):228-237. *Authors contributed equally.
Packer AM*, Peterka DS*, Hirtz JJ, Prakash R, Deisseroth K, Yuste R (2012) Two-photon optogenetics of dendritic spines and neural circuits
Nature Methods 9:1202-1205. *Authors contributed equally.
Prakash R, Yizhar O, Grewe B, Ramakrishnan C, Wang N, Goshen I, Packer AM, Peterka DS, Yuste R, Schnitzer MJ, Deisseroth, K (2012) Two-photon optogenetic toolbox for fast inhibition, excitation, and bistable modulation
Nature Methods 9:1171-1179.
Packer AM, Yuste R (2011) Dense, unspecific connectivity of neocortical parvalbumin-positive interneurons: a canonical microcircuit for inhibition?
Journal of Neuroscience 31(37):13260-13271. *Selected for cover
Ahmadian Y, Packer AM, Yuste R, Paninski L. (2011) Designing optimal stimuli to control neuronal spike timing
J. Neurophys. 106(2):1038-1053.
Snider SB, Yuste R, Packer AM. (2010) A neural circuit for angular velocity computation
Frontiers in Neural Circuits 4:123.
McGarry LM, Packer AM, Fino E, Nikolenko V, Sippy T, Yuste R. (2010) Quantitative classification of somatostatin-positive neocortical interneurons identifies three interneuron subtypes
Frontiers in Neural Circuits 4:12.
Vogelstein J, Packer AM, Machado T, Sippy T, Babadi B, Yuste R, Paninski L. (2010) Fast non-negative deconvolution for spike train inference from population calcium imaging
J. Neurophys. 104(6):3691-704.
Vogelstein J, Watson B, Packer AM, Yuste R, Jedynak B, Paninski L. (2009) Spike inference from calcium imaging using sequential Monte Carlo methods
Biophysical Journal 97:636-55.
Ascoli G, et al. (2008) Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex
Nature Reviews Neuroscience 9:557-568.